PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A11G0849
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 445aa    MW: 48234.1 Da    PI: 6.6898
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A11G0849genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1728.7e-23326388163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L++eN aL++e+++l+++++k++ e+
  Gh_A11G0849 326 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLEN 388
                  89*******************************************************998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.2E-3358151IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.0E-18179305No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-18320385No hitNo description
SMARTSM003388.4E-21326390IPR004827Basic-leucine zipper domain
PfamPF001701.7E-20326388IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.128328391IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-11329382No hitNo description
CDDcd147024.61E-23331380No hitNo description
PROSITE patternPS000360333348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MGSARIDGPT QPPTVPSLIY GGFVHFQEKE ESRVSDFKLT ERGEPTSIKG FTFGALTMGN  60
NDEGKSSKSD KSSSPVPTDQ NNIHVYSDWA AMQAYYGPHV NMPPYYSSAV ASGHAPPAYM  120
WGLTQPMMPP YGAPYATIYS HGGVFAHPAV PLVLDITSSI LMQAAGPVET PVKSPGNTEQ  180
GLMKKLKGFD GLAISIGNGT AKNAEGRAKP RPSHSVETAG STDGSDGNTT GTDQSRWKRS  240
REGTPTLGMT PFFTVEDEKI EAKSYQVAAG EVTATISPKP IGTVVSPGMT TGTILELRNT  300
PNKNAMSSAM GVHCGVMPTE VWLQNERELK RERRKQSNRE SARRSRLRKQ AETEELARKV  360
ESLTSENAAL RSEINQLTEM SEKVRLENAI LVEELKNAQL GHGQENVLNK KEDKEDEMCE  420
KKSDSGAKLH QLLDPSPRDD VVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1342348RRSRLRK
2342349RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.73890.0boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012490047.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_012490048.10.0PREDICTED: G-box-binding factor 3-like isoform X1
SwissprotP427761e-116GBF3_ARATH; G-box-binding factor 3
TrEMBLA0A0B0NYG10.0A0A0B0NYG1_G
STRINGPOPTR_0002s16870.11e-144(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35712661
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-97G-box binding factor 3